Protein ZmGATA22
ZmGATA22 is a protein in the C2C2-GATA family.
Information
TF Name: ZmGATA22
Species: Maize
TF Family: C2C2-GATA
Gene Name(Synonym): GATA22
Uniprot ID: A0A1D6PDQ1

Protein ZmGATA22

ZmGATA22 is a protein in the C2C2-GATA family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d053940DAPseq no logo sequence fimo position
Zm00001d053940DAPseq no logo sequence fimo position
Zm00001d053940ChIPseq no logo sequence fimo position
Zm00001d053940PChIPseq no logo sequence fimo position

Interactions where ZmGATA22 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmGATA22 is the target  
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There are 33 protein-dna interactions that fit this criteria. download excel sheet

Zm00001d053940_T001 from maize genome v4

Amino Acid Sequence
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MRQLSYLSGLDGLDDGVADCDGSCGLRDDGPPCLLHSGLCCPIGPLDDETDTVAIAIDNDKELLQDLAVAAGRVAASPLS
SGNSPSSSAVETTTTLPPTPWRFVVPRRKRRKRRDRRPVVMRGSIRPGIPTLHAAAMSSSSSSSGNNRPCSLTAETSSPP
QLWRLVVPTRKRDRRPVVMRGSIKRPCSLGTTPGIPTPHAAGNSNPSSSSGGGSTGARRQLESLQATWLQQYMGRW

MRQLSYLSGLDGLDDGVADCDGSCGLRDDGPPCLLHSGLCCPIGPLDDETDTVAIAIDNDKELLQDLAVAAGRVAASPLS
SGNSPSSSAVETTTTLPPTPWRFVVPRRKRRKRRDRRPVVMRGSIRPGIPTLHAAAMSSSSSSSGNNRPCSLTAETSSPP
QLWRLVVPTRKRDRRPVVMRGSIKRPCSLGTTPGIPTPHAAGNSNPSSSSGGGSTGARRQLESLQATWLQQYMGRW

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available

Nucleotide Sequence
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ATGCGTCAGCTCTCGTACCTCTCTG...


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